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Pawel Jaruga, R Jabil, Amanda K. McCullough, H Rodriguez, M Miral Dizdar, R S. Lloyd
A DNA glycosylase specific for UV radiation-induced pyrimidine dimers has been identified from chlorella virus Paramecium bursaria chlorella virus-1. This enzyme (Chlorella virus Pyrimidine dimer glycosylase [cv-pdgl) exhibits a 41% amino acid identity
Marcia J. Holden, M P. Mayhew, David T. Gallagher, V L. Vilker
By removing the enolpyruvyl group from chorismate, chorismate lyase (CL) produces p-hydroxybenzoate (p-HB) for the ubiquinone biosynthetic pathway. We have analyzed CL by several spectroscopic and chemical techniques and measured its kinetic (k cat = 1.7x
S. M. Burgess, Pawel Jaruga, M L. Dodson, Miral M. Dizdar, R S. Lloyd
Endonuclease VIII from Escherichia coli is a DNA glycosylase/lyase that removes oxidatively damaged bases. EndoVIII is a functional homologue of endonuclease III, but a sequence homologue of formamidopyrimidine DNA glycosylase (Fpg). Using multiple
A Sandberg, J Leckner, Y. Shi, Frederick P. Schwarz, B G. Karlsson
Thermodynamic equilibrium transition models in DSC are only applicable to reversible processes, but reversibility of the thermal transitions of proteins is comparatively rare because of intermolecular aggregation of denatured proteins and the degradation
International agreements and decisions concerning global trade, the environment and health care increasingly call for mutual recognition of measurements and standards between nations. Such mutual recognition can remove technical barriers to trade
John J. Kasianowicz, S. E. Henrickson, Martin Misakian, H H. Weetall, B Robertson, Vincent M. Stanford
Polymer transport is central to many biological processes, including protein translocation, bacterial gene transduction and some modes of viral infection. To better understand the mechanisms of macromolecular transport, we are studying the ability of
Vytautas Reipa, M P. Mayhew, Marcia J. Holden, V L. Vilker
Spectroelectrochemical measurements are used to demonstrate that active site mutation and binding of a non-natural substrate to P450cam (CYP101) reduces the shift in the redox potential caused by substrate-binding, and thereby results in slower catalytic
C D. O'Connell, Donald H. Atha, J P. Jakupciak, Kristy L. Richie
To provide the clinical diagnostics community with accurate protocols and measurements for the detection of genetic disorders, we have established a quantitative a quantitative measurement program for trinucleotide repeats associated with human disease. In
O M. Andersen, Frederick P. Schwarz, Edward Eisenstein, C Jacobsen, S K. Moestrup, M Etzerodt, H C. Thogersen
The 39 Kda receptor-associated protein (RAP) is a three-domain escort protein in the secretory pathway for several members of the low-density lipoprotein receptor (LDLR) family of endocytic receptors, including the LDLR-related protein (LRP). The minimal
J Tuo, M Muftuoglu, C Chen, Pawel Jaruga, R R. Selzer, R M. Brosh, H Rodriguez, Miral M. Dizdar, V. Bohr
Cockayne Syndrome (CS) is a human genetic disorder with two complementation groups, CS-A and CS-B. The CSB gene product is involved in transcription-coupled repair of DNA damage but may participate in other pathways of DNA metabolism. The present study
R Schoske, John Butler, Peter Vallone, Margaret C. Kline, M. Prinz, A J. Redd, M F. Hammer
Y Chromosome short tandem repeat markers have a number of applications in human identity testing including typing the perpetrator of sexual assault cases without differential extraction and tracing paternal lineages for missing person investigations. In
Donald H. Atha, W Kasprzak, C D. O'Connell, B A. Shapiro
We have analyzed previously three representative p53 single-point mutations by capillary-electrophoresis single-strand conformational polymorphism (CE-SSCP) . In the current study, we compared our CE-SSCP. In the current study, we compared our CE-SSCP
Differential scanning calorimeters (DSCs) have been widely used to determine the thermodynamics of phase transitions and conformational changes in biological systems including proteins, nucleic acid sequences, and lipid assemblies. DSCs monitor the
The enzyme chorismate lyase from E. coli crystallizes in three well characterized polymorphs in identical conditions. Wild-type enzyme tends to aggregate, even in the presence of reducing agent, and yields monoclinic crystals that grow in intricate
The thermodynamics of the lipase-catalyzed esterification of glycerol with n-octanoic acid have been investigated with acetonitrile, benzene, and toluene as solvents and in the neat reaction mixture (no organic solvent added). This esterification reaction
An intron (or intervening sequence) is a segment of RNA excised from a gene transcript, with concomitant ligation of flanking segments called exons. Introns of some type are found in every kingdom of cellular life, and also in viruses, bacteriophages and
Endonuclease VIII (Nei) is one of three enzymes in Escherichia coli that are involved in base-excision repair of oxidative damage to DNA. We investigated the substrate specificity and excision kinetics of this DNA glycosylase for bases in DNA that have
We describe a technique for the measurement of fluid temperatures in microfluidic systems based on temperature-dependent fluorescence. The technique is easy to implement with a standard fluorescence microscope and CCD camera. The efficiency of the method
Sathyavelu K. Reddy, M A. Kamireddi, K. Dhanireddi, L. Young, A M. Davis, Prasad T. Reddy
We have cloned a cya gene from a human pathogen Mycobacterium tuberculosis H37Rv by complementation of catabolic defect. (Accession No. AF017731, 1977). M. tuberculosis H37Rv genome sequence revealed five genes (Rv1264, Rv1318c, Rv1319c, Rv1320c, and
The Formamidopyrimidine N-DNA glycosylase (Fpg protein) of Escherichia coli is a DNA repair enzyme that is specific for the removal of purine-derived lesions from DNA damaged by free radicals and other oxidative processes. We investigated the effect of