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Martin Y. Chiang, Hongbing Wang, Li Zhong, Qiaoyan Tan, Gurinder K. Singh, Song Li, Li Yang, Yanzi Yangben
Polyacrylamide gels with different stiffness and glass were employed as substrates to investigate how substrate stiffness affects the cellular stiffness of adherent hepatocellular carcinoma (HCCLM3) and hepatic (L02) cells. The interaction of how cell
Daniel R. Sisan, Michael Halter, Joseph B. Hubbard, Anne L. Plant
In this paper, we develop a potential landscape approach to quantitatively describe experimental data from a fibroblast cell line that expresses GFP under the control of the promoter for tenascin-C. Time lapse live cell microscopy provides data about short
Justin M. Zook, Amy Gargis, Lisa Kalman, Ira Lubin
We would like to draw your readers attention to the Next-generation Sequencing: Standardization of Clinical Testing (Nex-StoCT) guidelines, which represent an initial step toward ensuring that the results derived from next-generation sequencing (NGS)
Microstructures of biomedical scaffolds can greatly affect cellular activities in tissue regeneration. In particular, scaffolds used in bone tissue regeneration should have several microstructural characteristics, including high porosity, appropriate pore
Conni Hanke, Petra S. Dittrich, Darwin Reyes-Hernandez
A cell co-culture was generated on opposite sides of a permeable polyester membrane (PET) membrane by combining dielectrophoretic (DEP) and electrostatic forces to hold cells against gravity in a multilayer microfluidic device (Figure 1). HepG2 cells were
Background Characterization of whole transcriptomes from small RNA samples (less than 1 ng total RNA) has been a major challenge. Typically, samples are extracted and purified, amplified by in vitro transcription (IVT), and then subjected to genome-scale
Jason G. Kralj, Samuel P. Forry, Matt S. Munson, Thomas P. Forbes, Chandamany Arya, Lynn Sorbara, Alessandro Tona, Sudhir Srivastava
We have developed a system to isolate rare cells from whole blood using commercially available components and simple microfluidics that can provide biologists with the capabilities of the monolithic devices. We characterized the capture of MCF-7 cells
Simona Bancos, De-Hao D. Tsai, Vincent A. Hackley, J L. Weaver, Katherine M. Tyner
Nanoparticles (NPs) are known to interfere with many high throughput cell viability and cell proliferation assays, which complicates the assessment of their potential toxic effects. The aim of this study was to compare viability and proliferation results
Justin M. Zook, Melissa D. Halter, Danielle Cleveland, Stephen E. Long
Silver nanoparticles (AgNPs) are frequently coated by a variety of polymers, which may affect various intertwined mechanisms of toxicity, including agglomeration and dissolution rate. Here, we measure how citrate, dextran, poly(ethylene glycol) (PEG)
Few technologies are more widespread in modern biological laboratories than imaging by microscopy. Advancements in optical technologies and instrumentation over the past twenty years have led to massive improvements in the resolution, specificity
Maritoni A. Litorja, Robert C. Chang, Jeeseong Hwang, David W. Allen
The determination of the level of oxygenation in optically accessible tissues using multispectral or hyperspectral imaging (HSI ) of oxy- and deoxyhemoglobin has special appeal in clinical work due to its non-invasiveness, ease of use and capability of
Autumn S. Downey, Sandra M. Da Silva, Jayne B. Morrow, James J. Filliben, Nathanael D. Olson
Environmental sampling for microbiological contaminants is a key component of hygiene monitoring and risk characterization practices utilized across diverse fields of application. However, confidence in surface sampling results, both in the field and in
Justin M. Zook, Daniel V. Samarov, Jennifer H. McDaniel, Shurjo Sen, Marc L. Salit
While the importance of random sequencing errors decreases at higher DNA or RNA sequencing depths, systematic sequencing errors (SSEs) dominate at high sequencing depths and can be difficult to distinguish from biological variants. These SSEs can cause
Neuron-specific in vitro screening strategies have the potential to accelerate the evaluation of chemicals or nanomaterials for neurotoxicity. We examined the effect of lithium ion, which is known to inhibit neurite outgrowth in neuron monocultures, on rat
Illarion V. Turko, Meiyao Wang, Gun-Young Heo, Saida Omarova, Irina A. Pikuleva
Quantitative analysis of low-abundance membrane proteins remains a challenge and requires further optimization of analytical methods developed for their soluble counterparts. Use of stable isotope-labeled full-length proteins as an internal standard in
Conni Hanke, Petra S. Dittrich, Darwin Reyes-Hernandez
We present a new system for cell capturing on permeable polyester (PET) membranes using dielectrophoretic forces. For the first time gold microelectrodes were fabricated on PET membranes using conventional photolithographic techniques. Their
Jenni R. Popp, Justine Roberts, Douglas V. Gallagher, Kristi S. Anseth, Stephanie Bryant, Timothy P. Quinn
Mechanical stimulation is essential for chondrocyte metabolism and cartilage matrix deposition. In vitro, mechanical stimulation is accomplished via culture in a bioreactor. Traditional methods for evaluating the developing tissue are destructive, time
To transform the linear fluorescence intensity scale obtained with fluorescent microspheres to an antibody bound per cell (ABC) scale, a biological cell reference material is needed. Optimally, this material should have a reproducible and tight ABC value
David Gallagher, Janet Newman, Evan E. Bolton, Jochen M?Dieckmann, Vincent J. Fazio, David Lovell, Joseph R. Luft, Thomas S. Peat, David Ratcliffe, Roger A. Sayle, Edward H. Snell, Kerry Taylor, Pascal Vallotton, Sameer Velankar, Frank V. Delft
Crystallisation of biological macromolecules is seen by most structural biologists as a necessary evil, a means to the end, which is knowledge about a macromolecular structure. Crystallization remains largely a trial-and-error process, with extensive
David W. Allen, Jeeseong Hwang, Maritoni A. Litorja, Joseph P. Rice
Biomedical optical imaging has the potential to achieve high spatial resolution and high functional sensitivity for non-invasive assessment of ischemic wounds. However, clinical acceptance of many optical imaging devices is hampered by poor reproducibility
David E. Morris, Melissa L. Mather, Carl Simon Jr., John A. Crowe
The performance of polymer based scaffolds used in regenerative medicine is linked to their structural properties and as such strategies for structural characterization of scaffolds have been developed. X-ray microscopic computed tomography (X-ray micro CT