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Sequence Alignments

General Information 

Why align sequences?

How to use sequence alignment files

Regions aligned

  • UL34
  • UL54 (polymerase)
  • UL55-56 (glycoprotein B)
  • UL80
  • UL83 (phosphoprotein 65)
  • UL122-126 (major immediate early area and nearby sequence)
  • US17

SeqMan files (v1.0)
FASTA formatted text files (v2.1)
Searchable text files (v1.0)

If you would like to see a different file type please send comments to ross.haynes [at] (Ross Haynes)


Created November 5, 2009, Updated January 6, 2020