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Non-planar nanofluidic devices for single molecule analysis fabricated using nanoglassblowing



Elizabeth Strychalski, Samuel Stavis, Harold G. Craighead


A method termed 'nanoglassblowing' is presented for fabricating integrated microfluidic and nanofluidic devices with gradual depth changes and wide, shallow nanochannels.  This method was used to construct fused silica channels with out-of-plane curvature of channel covers from over ten micrometers to a few nanometers, nanochannel aspect ratios smaller than 2x10-5:1 (depth:width), and nanochannel depths as shallow as 7 nm.  These low aspect ratios and shallow channel depths would be difficult to form otherwise without collapse of the channel cover, and the gradual changes in channel depth eliminate abrupt free energy barriers at the transition from microfluidic to nanofluidic regions.  Devices were characterized with atomic force microscopy (AFM), white light interferometry, scanned height measurements, fluorescence intensity traces, and single molecule analysis of double-stranded deoxyribonucleic acid (DNA) velocity and conformation.  Nanochannel depths and aspect ratios formed by nanoglassblowing allowed measurements of the radius of gyration, Rg, of single λ DNA molecules confined to slit-like nanochannels with depths, d, ranging from 11 nm to 507 nm.  Measurements of Rg as a function of d agree qualitatively with the scaling law Rg α d^-0.25 predicted by Brochard for nanochannel depths from 36 nm to 156 nm, while measurements of Rg in 11 nm and 507 nm deep nanochannels deviate from this prediction.


nanoglassblowing, glassblowing, fabrication, out-of-plane, non-planar, nanofluidic, microfluidic, DNA, fused silica


Strychalski, E. , Stavis, S. and Craighead, H. (2008), Non-planar nanofluidic devices for single molecule analysis fabricated using nanoglassblowing, Nanotechnology, [online], (Accessed May 19, 2024)


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Created June 16, 2008, Updated October 12, 2021