Contact: Anne Enright Shepherd, aeshep@nist.gov
ATP FOCUSED PROGRAM:
Tools for DNA Diagnostics
FY 1994 NIST Funding: $25 million
Total FY 1994-98 NIST-Funding: $145 million
Potential for U.S. Economic Benefit
Deoxyribonucleic acid (DNA) attained celebrity status among
molecules in the 1950s when scientists first uncovered its now
famous double helix structure. In the following decades, scientists
began to show how the molecular basis of life flows from DNA. Since
1990, the National Institutes of Health and the Department of
Energy have been funding a major effort -- called the Human Genome
Project (HGP) -- to map out the thousands of individual genes
strung along the 46 chromosomes in human cells and to sequence each
gene. Each gene is made of four kinds of building blocks, called
nucleotides, that link into linear sequences hundreds or thousands
of nucleotides long. In the end, researchers hope to have mapped
out the entire human genome, which is about 3 billion nucleotides
long.
Scientists and physicians expect that the HGP will prove to be a
fountain of insights to now poorly understood biological phenomena
and diseases and to new treatments for genetically based ailments.
Industry -- the biotechnology sector and users of biotechnology's
wares -- expects that it will become both the impetus and basis of
new multibillion dollar markets stemming from DNA-based diagnostic
tests. According to industry projections for 1997, the DNA-based
portion of the in-vitro (outside of the body) diagnostics industry
is expected to reach into the vicinity of $500 million of a total
estimated market of well over $18 billion, up from a $58 million
portion of an estimated $5 billion market in 1992.
By 2005, DNA probes are expected to account for $6 billion, or 15
percent, of a $40 billion in-vitro diagnostics market. At the
moment, the United States enjoys a lead position in this ever more
global industry.
That's where the ATP's focus on Tools for DNA Diagnostics comes in.
According to representatives in the pharmaceutical, biotechnology,
and analytical instrumentation industries, reaping the full
potential of the HGP will require the development of new methods,
instruments, and data-handling protocols. More specifically, DNA
analyses and sequence interpretation will have to speed up by a
factor of 10 and costs will have to fall to one-tenth to
one-hundredth of the present price tag, which is in the range of
$100 or more per test. Meeting these goals will help U.S. companies
maintain their advantageous position in the coming years of the
biotechnology revolution. The industries and technical arenas that
stand to benefit from the program include healthcare, forensics,
biomedical research, environmental monitoring and bioremediation,
toxicology, drug design, animal husbandry, agriculture, and quality
control in the food industry.
Technology Challenge
The initial goal of the Tools for DNA Diagnostics program is to
develop cost-effective methods for sequencing, interpreting, and
storing DNA sequences for diagnostic applications ranging from
healthcare to agriculture to environmental monitoring. Moreover,
these methods need to be highly automated, miniaturized whenever
possible, easy to use, and inexpensive as well as able to determine
and analyze DNA sequences accurately and rapidly. A working system
meeting these criteria might begin with the injection of a sample
into a cassette, which then would be positioned automatically into
an instrument that performs the sequencing and stores the results.
These results then could be displayed immediately on a computer
screen and transferred to a patient's records. By the end of the
five-year program, industry should have the technical tools and
know-how in hand with which they can design, engineer, and produce
commercial products like this one.
Industry Commitment
About 20 companies, which range in size from large established
pharmaceutical firms to small start-up companies as well as
non-profit research organizations, submitted the white papers
from which DNA diagnostics emerged as an area that the
biotechnology industry perceives to be badly in need of
development. These papers made it clear that the program will
require expertise in biological sample preparation, molecular
biology, microfabrication, surface chemistry, instrumentation
development and engineering, molecular detection technologies,
information and data handling, and other areas. No single company
can claim that it has all of those strengths, but a collection of
companies, working toward common goals, can.
Significance of ATP Funds
A glimpse of what this focused program in Tools for DNA Diagnostics
might mean comes from a current ATP project. The project involves
the Genosensor Consortium, a group of companies that combines
expertise in instrumentation, micro-electronics, chemical synthesis
of DNA, and diagnostic test development. Without ATP funding, the
risk would have been too high for the smaller consortium members to
even consider pursuing the goals of the project. Larger members,
whose stockholders may not be patient enough to wait for long-term
payoff, also would likely have put the project on hold.
The ATP program on DNA diagnostics can leverage existing government
investments in DNA research to achieve the aim of low-cost DNA
diagnostic technologies on a much larger scale. It can help U.S.
industry to maintain its global leadership in the biotechnology
industry. The HGP goes part of the way by supporting the research
that produces the maps and sequences. But it does not support
technology development for diagnostics, which ultimately must be
more user friendly and automated than state-of-the-art instruments
for basic research in the laboratory setting.
At the moment, companies that are well positioned to develop DNA
diagnostic tools are often hesitant to push forward without
additional government support because any of a number of competing
analytical methodologies could turn out to be the most suitable for
DNA diagnostics. Betting on one technology, which is all that most
companies could hope to do, is too much of a gamble. The ATP Tools
for DNA Diagnostics program both reduces and dilutes that risk. The
payoff could be the technology base for a new multibillion dollar
industrial base in the United States that will keep the country on
top in biotechnology and widen its scope of industrial
applications.
April 1994